Sequence analysis with profile Hidden Markov Models. Can search our BLAST format databases.
HMMER is an implementation of profile HMM methods for sensitive database searches using multiple sequence alignments as queries.
HMMER is an implementation of profile HMM methods for sensitive ...
Program to score the words of a sequence against an alignment matrix
Scan a DNA sequence with a posiion-specific scoring matrix (PSSM)
Scan a DNA sequence with a posiion-specific scoring matrix (PSSM)
grappe is a pattern matching program. It looks, in a text, for a set of patterns containing don't care symbols (wildcards) of unbounded or bounded length. The size of patterns, as well as their length, is unlimited.
grappe is a pattern matching program. It looks, in a text, for a set o...
InterProScan is a tool that combines different protein signature recognition methods into one resource.
InterProScan is a tool that combines different protein signature recognition methods into one resource.
The MEME Suite allows you to: * discover motifs using MEME or GLAM2 on groups of related DNA or protein sequences, * search sequence databases using motifs, * compare a motif to all motifs in a database of motifs, and * associate motifs with Gene Ontology terms via their putative target...